Human SNP ID | rs10495024 |
---|---|
Human chromosome | chr1 |
Human SNP position | 216459606 |
Pig chromosome | chr10 |
Pig SNP position | 8604181 |
PubMed ID | 22675492 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/22675492 |
Study | Genome-wide association study of circulating estradiol, testosterone, and sex hormone-binding globulin in postmenopausal women. |
Disease/Trait | Testosterone levels |
Initial sample | 1,589 European ancestry female individuals |
Replication sample | NA |
Region | 1q41 |
Chromosome id | chr1 |
Chromosome position | 216459606 |
Reported gene | intergenic |
Mapped gene | USH2A - ESRRG |
Upstream gene id | 7399 |
Downstream gene id | 2104 |
SNP gene ids | |
Upstream gene distance | 36210 |
Downstream gene distance | 43640 |
SNP risk allele | rs10495024-C |
SNPs | rs10495024 |
Merged | 0 |
SNP id current | 10495024 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.36 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.103 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | testosterone measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004908 |
Study accession | GCST001555 |