SNP Detail For rs10494112
1.Mapping Information
Human SNP ID rs10494112
Human chromosome chr1
Human SNP position 109809855
Pig chromosome chr3
Pig SNP position 30369433
2.Annotation Information
PubMed ID21623375
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21623375
StudyGenome-wide association identifies three new susceptibility loci for Paget__s disease of bone.
Disease/TraitPaget__s disease
Initial sample741 European ancestry cases, 2,699 European ancestry controls
Replication sample1,474 European ancestry cases, 1,671 European ancestry controls
Region1p13.3
Chromosome idchr1
Chromosome position109809855
Reported geneCSF1, EPS8LS
Mapped geneEPS8L3 - CSF1
Upstream gene id79574
Downstream gene id1435
SNP gene ids
Upstream gene distance45833
Downstream gene distance100756
SNP risk allelers10494112-G
SNPsrs10494112
Merged0
SNP id current10494112
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.2
P value7E-35
Pvalue mlog34.1549019599857
P value text
Or beta1.72
%95 Ci[1.57-1.87]
PlatformIllumina [2487078] (imputed)
CNVN
Mapped traitosteitis deformans
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004261
Study accessionGCST001086