Human SNP ID | rs10494112 |
---|---|
Human chromosome | chr1 |
Human SNP position | 109809855 |
Pig chromosome | chr3 |
Pig SNP position | 30369433 |
PubMed ID | 21623375 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21623375 |
Study | Genome-wide association identifies three new susceptibility loci for Paget__s disease of bone. |
Disease/Trait | Paget__s disease |
Initial sample | 741 European ancestry cases, 2,699 European ancestry controls |
Replication sample | 1,474 European ancestry cases, 1,671 European ancestry controls |
Region | 1p13.3 |
Chromosome id | chr1 |
Chromosome position | 109809855 |
Reported gene | CSF1, EPS8LS |
Mapped gene | EPS8L3 - CSF1 |
Upstream gene id | 79574 |
Downstream gene id | 1435 |
SNP gene ids | |
Upstream gene distance | 45833 |
Downstream gene distance | 100756 |
SNP risk allele | rs10494112-G |
SNPs | rs10494112 |
Merged | 0 |
SNP id current | 10494112 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.2 |
P value | 7E-35 |
Pvalue mlog | 34.1549019599857 |
P value text | |
Or beta | 1.72 |
%95 Ci | [1.57-1.87] |
Platform | Illumina [2487078] (imputed) |
CNV | N |
Mapped trait | osteitis deformans |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004261 |
Study accession | GCST001086 |