SNP Detail For rs10492604
1.Mapping Information
Human SNP ID rs10492604
Human chromosome chr13
Human SNP position 58330179
Pig chromosome chr11
Pig SNP position 32775035
2.Annotation Information
PubMed ID17903308
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/17903308
StudyGenome-wide association of sleep and circadian phenotypes.
Disease/TraitSleep-related phenotypes
Initial sampleup to 738 individuals from 203 families
Replication sampleNA
Region13q21.1
Chromosome idchr13
Chromosome position58330179
Reported geneintergenic
Mapped geneLOC101926897 - CTAGE16P
Upstream gene id101926897
Downstream gene id341689
SNP gene ids
Upstream gene distance120696
Downstream gene distance198436
SNP risk allelers10492604-?
SNPsrs10492604
Merged0
SNP id current10492604
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text(Sleep duration)
Or beta
%95 Ci
PlatformAffymetrix [70897]
CNVN
Mapped traitsleep measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004870
Study accessionGCST000081