Human SNP ID | rs10490626 |
---|---|
Human chromosome | chr2 |
Human SNP position | 118078265 |
Pig chromosome | chr15 |
Pig SNP position | 27035346 |
PubMed ID | 24097068 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24097068 |
Study | Discovery and refinement of loci associated with lipid levels. |
Disease/Trait | LDL cholesterol |
Initial sample | 94,595 European ancestry individuals |
Replication sample | 93,982 European ancestry individuals |
Region | 2q14.1 |
Chromosome id | chr2 |
Chromosome position | 118078265 |
Reported gene | INSIG2 |
Mapped gene | LOC105373988 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105373988 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10490626-A |
SNPs | rs10490626 |
Merged | 0 |
SNP id current | 10490626 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.08 |
P value | 0.000000000002 |
Pvalue mlog | 11.698970004336 |
P value text | |
Or beta | 0.051 |
%95 Ci | [NR] unit decrease |
Platform | NR [NR] (imputed) |
CNV | N |
Mapped trait | low density lipoprotein cholesterol measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004611 |
Study accession | GCST002222 |
PubMed ID | 24097068 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24097068 |
Study | Discovery and refinement of loci associated with lipid levels. |
Disease/Trait | Cholesterol, total |
Initial sample | 94,595 European ancestry individuals |
Replication sample | 93,982 European ancestry individuals |
Region | 2q14.1 |
Chromosome id | chr2 |
Chromosome position | 118078265 |
Reported gene | INSIG2 |
Mapped gene | LOC105373988 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105373988 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10490626-A |
SNPs | rs10490626 |
Merged | 0 |
SNP id current | 10490626 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.08 |
P value | 0.000000006 |
Pvalue mlog | 8.22184874961635 |
P value text | |
Or beta | 0.042 |
%95 Ci | [NR] unit increase |
Platform | NR [NR] (imputed) |
CNV | N |
Mapped trait | total cholesterol measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004574 |
Study accession | GCST002221 |