SNP Detail For rs10490113
1.Mapping Information
Human SNP ID rs10490113
Human chromosome chr2
Human SNP position 59272212
Pig chromosome chr3
Pig SNP position 86743335
2.Annotation Information
PubMed ID17903305
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/17903305
StudyA genome-wide association study of breast and prostate cancer in the NHLBI__s Framingham Heart Study.
Disease/TraitBreast cancer
Initial sample58 cases, 665 controls
Replication sampleNA
Region2p16.1
Chromosome idchr2
Chromosome position59272212
Reported geneintergenic
Mapped geneLOC101927285, LOC105374754
Upstream gene id
Downstream gene id
SNP gene ids101927285, 105374754
Upstream gene distance
Downstream gene distance
SNP risk allelers10490113-?
SNPsrs10490113
Merged0
SNP id current10490113
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta
%95 Ci
PlatformAffymetrix [70897]
CNVN
Mapped traitbreast carcinoma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000305
Study accessionGCST000079