SNP Detail For rs10489896
1.Mapping Information
Human SNP ID rs10489896
Human chromosome chr1
Human SNP position 234447872
Pig chromosome chr14
Pig SNP position 60753769
2.Annotation Information
PubMed ID17903297
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/17903297
StudyGenetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study.
Disease/TraitCognitive test performance
Initial sample694 European ancestry individuals
Replication sampleNA
Region1q42.2
Chromosome idchr1
Chromosome position234447872
Reported geneTARBP1
Mapped geneTARBP1
Upstream gene id
Downstream gene id
SNP gene ids6894
Upstream gene distance
Downstream gene distance
SNP risk allelers10489896-?
SNPsrs10489896
Merged0
SNP id current10489896
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text(F2)
Or beta
%95 Ci
PlatformAffymetrix [70897]
CNVN
Mapped traitneuropsychological test
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003926
Study accessionGCST000098