SNP Detail For rs10489849
1.Mapping Information
Human SNP ID rs10489849
Human chromosome chr1
Human SNP position 159226975
Pig chromosome chr4
Pig SNP position 99200273
2.Annotation Information
PubMed ID17903293
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/17903293
StudyGenome-wide association with select biomarker traits in the Framingham Heart Study.
Disease/TraitSelect biomarker traits
Initial sample1,012 European ancestry individuals
Replication sampleNA
Region1q23.2
Chromosome idchr1
Chromosome position159226975
Reported geneIGSF4B
Mapped geneACKR1 - FCER1A
Upstream gene id2532
Downstream gene id2205
SNP gene ids
Upstream gene distance20475
Downstream gene distance56913
SNP risk allelers10489849-?
SNPsrs10489849
Merged0
SNP id current10489849
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text(MCP1)
Or beta
%95 Ci
PlatformAffymetrix [70897]
CNVN
Mapped traitCCL2 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004749
Study accessionGCST000083