SNP Detail For rs10489764
1.Mapping Information
Human SNP ID rs10489764
Human chromosome chr1
Human SNP position 188116702
Pig chromosome chr10
Pig SNP position 6339899
2.Annotation Information
PubMed ID24529757
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/24529757
StudyGenome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations.
Disease/TraitAmyotrophic lateral sclerosis (sporadic)
Initial sample250 Han Chinese ancestry cases, 250 Han Chinese ancestry controls
Replication sampleNA
Region1q31.1
Chromosome idchr1
Chromosome position188116702
Reported geneFAM5C
Mapped geneLOC100129274 - RPS3AP9
Upstream gene id100129274
Downstream gene id100271129
SNP gene ids
Upstream gene distance401380
Downstream gene distance577592
SNP risk allelers10489764-?
SNPsrs10489764
Merged0
SNP id current10489764
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta
%95 Ci
PlatformIllumina [859311]
CNVN
Mapped traitsporadic amyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001357
Study accessionGCST002337