SNP Detail For rs10488084
1.Mapping Information
Human SNP ID rs10488084
Human chromosome chr7
Human SNP position 30043405
Pig chromosome chr18
Pig SNP position 47275005
2.Annotation Information
PubMed ID22675492
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22675492
StudyGenome-wide association study of circulating estradiol, testosterone, and sex hormone-binding globulin in postmenopausal women.
Disease/TraitEstradiol levels
Initial sample1,583 European ancestry female individuals
Replication sampleNA
Region7p14.3
Chromosome idchr7
Chromosome position30043405
Reported genePLEKHA8, FKBP14
Mapped genePLEKHA8
Upstream gene id
Downstream gene id
SNP gene ids84725
Upstream gene distance
Downstream gene distance
SNP risk allelers10488084-C
SNPsrs10488084
Merged0
SNP id current10488084
Contextintron_variant
Intergenic0
Allele frequency0.08
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.18
%95 Ci[NR] unit increase
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitestradiol measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004697
Study accessionGCST001553