Human SNP ID | rs10488084 |
---|---|
Human chromosome | chr7 |
Human SNP position | 30043405 |
Pig chromosome | chr18 |
Pig SNP position | 47275005 |
PubMed ID | 22675492 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/22675492 |
Study | Genome-wide association study of circulating estradiol, testosterone, and sex hormone-binding globulin in postmenopausal women. |
Disease/Trait | Estradiol levels |
Initial sample | 1,583 European ancestry female individuals |
Replication sample | NA |
Region | 7p14.3 |
Chromosome id | chr7 |
Chromosome position | 30043405 |
Reported gene | PLEKHA8, FKBP14 |
Mapped gene | PLEKHA8 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84725 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10488084-C |
SNPs | rs10488084 |
Merged | 0 |
SNP id current | 10488084 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.08 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.18 |
%95 Ci | [NR] unit increase |
Platform | Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | estradiol measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004697 |
Study accession | GCST001553 |