SNP Detail For rs10486860
1.Mapping Information
Human SNP ID rs10486860
Human chromosome chr7
Human SNP position 96969514
Pig chromosome chr9
Pig SNP position 84228290
2.Annotation Information
PubMed ID25064007
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25064007
StudyA genome-wide association study identifies susceptibility loci for ossification of the posterior longitudinal ligament of the spine.
Disease/TraitOssification of the posterior longitudinal ligament of the spine
Initial sample1,112 Japanese ancestry cases, 6,810 Japanese ancestry controls
Replication sample548 Japanese ancestry cases, 6,469 Japanese ancestry controls
Region7q21.3
Chromosome idchr7
Chromosome position96969514
Reported geneNR
Mapped geneDLX6-AS1
Upstream gene id
Downstream gene id
SNP gene ids285987
Upstream gene distance
Downstream gene distance
SNP risk allelers10486860-?
SNPsrs10486860
Merged0
SNP id current10486860
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta1.24
%95 Ci[1.13-1.36]
PlatformIllumina [5163786] (imputed)
CNVN
Mapped traitossification of the posterior longitudinal ligament of the spine
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005895
Study accessionGCST002545