Human SNP ID | rs10486860 |
---|---|
Human chromosome | chr7 |
Human SNP position | 96969514 |
Pig chromosome | chr9 |
Pig SNP position | 84228290 |
PubMed ID | 25064007 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25064007 |
Study | A genome-wide association study identifies susceptibility loci for ossification of the posterior longitudinal ligament of the spine. |
Disease/Trait | Ossification of the posterior longitudinal ligament of the spine |
Initial sample | 1,112 Japanese ancestry cases, 6,810 Japanese ancestry controls |
Replication sample | 548 Japanese ancestry cases, 6,469 Japanese ancestry controls |
Region | 7q21.3 |
Chromosome id | chr7 |
Chromosome position | 96969514 |
Reported gene | NR |
Mapped gene | DLX6-AS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 285987 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10486860-? |
SNPs | rs10486860 |
Merged | 0 |
SNP id current | 10486860 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 1.24 |
%95 Ci | [1.13-1.36] |
Platform | Illumina [5163786] (imputed) |
CNV | N |
Mapped trait | ossification of the posterior longitudinal ligament of the spine |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005895 |
Study accession | GCST002545 |