Human SNP ID | rs10466455 |
---|---|
Human chromosome | chr11 |
Human SNP position | 34759389 |
Pig chromosome | chr2 |
Pig SNP position | 28596878 |
PubMed ID | 24871463 |
---|---|
Journal | Genes Immun |
Link | www.ncbi.nlm.nih.gov/pubmed/24871463 |
Study | GWAS identifies novel SLE susceptibility genes and explains the association of the HLA region. |
Disease/Trait | Systemic lupus erythematosus |
Initial sample | 725 European ancestry cases, 2,438 European ancestry controls |
Replication sample | NA |
Region | 11p13 |
Chromosome id | chr11 |
Chromosome position | 34759389 |
Reported gene | EHF |
Mapped gene | LOC102723568 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 102723568 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10466455-T |
SNPs | rs10466455 |
Merged | 0 |
SNP id current | 10466455 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.58 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | |
Or beta | 1.3774 |
%95 Ci | [1.3-1.47] |
Platform | Illumina [NR] |
CNV | N |
Mapped trait | rheumatoid arthritis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000685 |
Study accession | GCST002463 |