SNP Detail For rs10466455
1.Mapping Information
Human SNP ID rs10466455
Human chromosome chr11
Human SNP position 34759389
Pig chromosome chr2
Pig SNP position 28596878
2.Annotation Information
PubMed ID24871463
JournalGenes Immun
Linkwww.ncbi.nlm.nih.gov/pubmed/24871463
StudyGWAS identifies novel SLE susceptibility genes and explains the association of the HLA region.
Disease/TraitSystemic lupus erythematosus
Initial sample725 European ancestry cases, 2,438 European ancestry controls
Replication sampleNA
Region11p13
Chromosome idchr11
Chromosome position34759389
Reported geneEHF
Mapped geneLOC102723568
Upstream gene id
Downstream gene id
SNP gene ids102723568
Upstream gene distance
Downstream gene distance
SNP risk allelers10466455-T
SNPsrs10466455
Merged0
SNP id current10466455
Contextintergenic_variant
Intergenic0
Allele frequency0.58
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta1.3774
%95 Ci[1.3-1.47]
PlatformIllumina [NR]
CNVN
Mapped traitrheumatoid arthritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000685
Study accessionGCST002463