Human SNP ID | rs10466239 |
---|---|
Human chromosome | chr10 |
Human SNP position | 43354379 |
Pig chromosome | chr14 |
Pig SNP position | 66459388 |
PubMed ID | 24478790 |
---|---|
Journal | Front Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24478790 |
Study | Genome wide association and linkage analyses identified three loci-4q25, 17q23.2, and 10q11.21-associated with variation in leukocyte telomere length: the Long Life Family Study. |
Disease/Trait | Telomere length |
Initial sample | 4,829 European ancestry individuals from 586 families with exceptional longevity |
Replication sample | NA |
Region | 10q11.21 |
Chromosome id | chr10 |
Chromosome position | 43354379 |
Reported gene | FXYD4, RASGEF1A |
Mapped gene | LOC105378271 - FXYD4 |
Upstream gene id | 105378271 |
Downstream gene id | 53828 |
SNP gene ids | |
Upstream gene distance | 4039 |
Downstream gene distance | 17265 |
SNP risk allele | rs10466239-T |
SNPs | rs10466239 |
Merged | 0 |
SNP id current | 10466239 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.073 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | |
%95 Ci | [NR] |
Platform | Illumina [9250000] (imputed) |
CNV | N |
Mapped trait | telomere length |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004505 |
Study accession | GCST002336 |