Human SNP ID | rs10453225 |
---|---|
Human chromosome | chr9 |
Human SNP position | 106157939 |
Pig chromosome | chr1 |
Pig SNP position | 277101261 |
PubMed ID | 25231870 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25231870 |
Study | Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche. |
Disease/Trait | Menarche (age at onset) |
Initial sample | Up to 182,413 European ancestry females |
Replication sample | NA |
Region | 9q31.2 |
Chromosome id | chr9 |
Chromosome position | 106157939 |
Reported gene | TMEM38B |
Mapped gene | LOC105376201 - LOC105376202 |
Upstream gene id | 105376201 |
Downstream gene id | 105376202 |
SNP gene ids | |
Upstream gene distance | 116589 |
Downstream gene distance | 152502 |
SNP risk allele | rs10453225-G |
SNPs | rs10453225 |
Merged | 0 |
SNP id current | 10453225 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.68 |
P value | 6E-66 |
Pvalue mlog | 65.2218487496163 |
P value text | |
Or beta | 0.09 |
%95 Ci | [0.08-0.1] unit increase |
Platform | Affymetrix, Illumina [2441815] (imputed) |
CNV | N |
Mapped trait | age at menarche |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004703 |
Study accession | GCST002541 |