Human SNP ID | rs10448044 |
---|---|
Human chromosome | chr8 |
Human SNP position | 79191197 |
Pig chromosome | chr4 |
Pig SNP position | 62566316 |
PubMed ID | 25917933 |
---|---|
Journal | J Psychiatr Res |
Link | www.ncbi.nlm.nih.gov/pubmed/25917933 |
Study | A genome-wide association study of suicide severity scores in bipolar disorder. |
Disease/Trait | Suicide in bipolar disorder |
Initial sample | 959 European ancestry individuals |
Replication sample | NA |
Region | 8q21.13 |
Chromosome id | chr8 |
Chromosome position | 79191197 |
Reported gene | IL7 |
Mapped gene | LOC105375912 - LOC105375915 |
Upstream gene id | 105375912 |
Downstream gene id | 105375915 |
SNP gene ids | |
Upstream gene distance | 242290 |
Downstream gene distance | 90882 |
SNP risk allele | rs10448044-C |
SNPs | rs10448044 |
Merged | 0 |
SNP id current | 10448044 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (suicide attempt) |
Or beta | 4.685 |
%95 Ci | z score increase |
Platform | Affymetrix, Illumina [2659407] (imputed) |
CNV | N |
Mapped trait | bipolar disorder, attempted suicide |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289, http://www.ebi.ac.uk/efo/EFO_0004321 |
Study accession | GCST002699 |