SNP Detail For rs10444487
1.Mapping Information
Human SNP ID rs10444487
Human chromosome chr12
Human SNP position 116163253
Pig chromosome chr14
Pig SNP position 38379205
2.Annotation Information
PubMed ID24939585
JournalEur J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24939585
StudyGenome-wide association analysis demonstrates the highly polygenic character of age-related hearing impairment.
Disease/TraitAge-related hearing impairment (interaction)
Initial sample1,489 European ancestry individuals
Replication sampleNA
Region6p21.1 x 12q24.21
Chromosome idchr6 x 12
Chromosome position40635318 x 116163253
Reported geneNR x NR
Mapped geneLRFN2 - LOC101929535 x MED13L
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers4301303-? x rs10444487-?
SNPsrs4301303 x rs10444487
Merged
SNP id current
Contextintergenic_variant x intron_variant
Intergenic
Allele frequencyNR
P value0.000000007
Pvalue mlog8.15490195998574
P value text
Or beta
%95 Ci
PlatformIllumina [629437] (imputed)
CNVN
Mapped traitage-related hearing impairment
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005782
Study accessionGCST002487