SNP Detail For rs1043607
1.Mapping Information
Human SNP ID rs1043607
Human chromosome chr12
Human SNP position 125658800
Pig chromosome chr14
Pig SNP position 29391740
2.Annotation Information
PubMed ID24322204
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/24322204
StudyGenome-wide association study of bipolar disorder accounting for effect of body mass index identifies a new risk allele in TCF7L2.
Disease/TraitBipolar disorder (body mass index interaction)
Initial sample388 European ancestry cases, 1,020 European ancestry controls
Replication sampleNA
Region12q24.32
Chromosome idchr12
Chromosome position125658800
Reported geneTMEM132B
Mapped geneTMEM132B
Upstream gene id
Downstream gene id
SNP gene ids114795
Upstream gene distance
Downstream gene distance
SNP risk allelers1043607-?
SNPsrs1043607
Merged0
SNP id current1043607
Context3_prime_UTR_variant
Intergenic0
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta
%95 Ci
PlatformNR [up to 8466825] (imputed)
CNVN
Mapped traitbipolar disorder, body mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289, http://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002306