Human SNP ID | rs1042779 |
---|---|
Human chromosome | chr3 |
Human SNP position | 52786995 |
Pig chromosome | chr13 |
Pig SNP position | 38096795 |
PubMed ID | 19416921 |
---|---|
Journal | Proc Natl Acad Sci U S A |
Link | www.ncbi.nlm.nih.gov/pubmed/19416921 |
Study | Genome-wide association and meta-analysis of bipolar disorder in individuals of European ancestry. |
Disease/Trait | Bipolar disorder |
Initial sample | 3,683 European ancestry cases, 14,507 European ancestry controls |
Replication sample | NA |
Region | 3p21.1 |
Chromosome id | chr3 |
Chromosome position | 52786995 |
Reported gene | ITIH1, NEK4 |
Mapped gene | ITIH1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3697 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1042779-A |
SNPs | rs1042779 |
Merged | 0 |
SNP id current | 1042779 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.63 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | |
Or beta | 1.19 |
%95 Ci | [1.11-1.27] |
Platform | Affymetrix, Illumina [2366197] (imputed) |
CNV | N |
Mapped trait | bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST000387 |