SNP Detail For rs1040994
1.Mapping Information
Human SNP ID rs1040994
Human chromosome chr6
Human SNP position 12196980
Pig chromosome chr7
Pig SNP position 9085220
2.Annotation Information
PubMed ID19721433
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/19721433
StudyGenome-wide pharmacogenomic analysis of response to treatment with antipsychotics.
Disease/TraitResponse to antipsychotic treatment
Initial sample494 European ancestry cases, 244 African American and other ancestry cases
Replication sampleNA
Region6p24.1
Chromosome idchr6
Chromosome position12196980
Reported geneintergenic
Mapped geneHIVEP1 - EDN1
Upstream gene id3096
Downstream gene id1906
SNP gene ids
Upstream gene distance31981
Downstream gene distance64234
SNP risk allelers1040994-?
SNPsrs1040994
Merged0
SNP id current1040994
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(olanzapine)
Or beta9
%95 Ci[NR] % variance
PlatformAffymetrix, Perlegen [492900]
CNVN
Mapped traitresponse to olanzapine
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097333
Study accessionGCST000473