SNP Detail For rs1039302
1.Mapping Information
Human SNP ID rs1039302
Human chromosome chr12
Human SNP position 120798455
Pig chromosome chr14
Pig SNP position 43199372
2.Annotation Information
PubMed ID19197348
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19197348
StudyGenome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
Disease/TraitQuantitative traits
Initial sample2,906 Kosraen individuals
Replication sampleNA
Region12q24.31
Chromosome idchr12
Chromosome position120798455
Reported geneSPPL3
Mapped geneSPPL3
Upstream gene id
Downstream gene id
SNP gene ids121665
Upstream gene distance
Downstream gene distance
SNP risk allelers1039302-T
SNPsrs1039302
Merged0
SNP id current1039302
Contextintron_variant
Intergenic0
Allele frequency0.36
P value0.000005
Pvalue mlog5.30102999566398
P value text(CRP)
Or beta0.21
%95 Ci[NR] mg/L increase
PlatformAffymetrix [408775]
CNVN
Mapped traitC-reactive protein measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004458
Study accessionGCST000337