SNP Detail For rs1034394
1.Mapping Information
Human SNP ID rs1034394
Human chromosome chr22
Human SNP position 34427837
Pig chromosome JH118960-1
Pig SNP position 152916
2.Annotation Information
PubMed ID23377640
JournalAm J Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23377640
StudyCommon genetic variation and antidepressant efficacy in major depressive disorder: a meta-analysis of three genome-wide pharmacogenetic studies.
Disease/TraitMajor depressive disorder
Initial sampleUp to 2,256 European ancestry cases
Replication sampleNA
Region22q12.3
Chromosome idchr22
Chromosome position34427837
Reported geneENOX1
Mapped geneLOC105373012 - LOC441996
Upstream gene id105373012
Downstream gene id441996
SNP gene ids
Upstream gene distance65524
Downstream gene distance160917
SNP risk allelers1034394-G
SNPsrs1034394
Merged0
SNP id current1034394
Contextintergenic_variant
Intergenic1
Allele frequency0.3390146
P value0.000002
Pvalue mlog5.69897000433601
P value text(% improvement - SSRI treated - 12 weeks)
Or beta0.2107
%95 Ci[0.12-0.3] unit increase
PlatformAffymetrix, Illumina [1200000] (imputed)
CNVN
Mapped traitunipolar depression
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003761
Study accessionGCST001850