SNP Detail For rs10264856
1.Mapping Information
Human SNP ID rs10264856
Human chromosome chr7
Human SNP position 87633265
Pig chromosome chr9
Pig SNP position 102114177
2.Annotation Information
PubMed ID26312577
JournalJ Clin Endocrinol Metab
Linkwww.ncbi.nlm.nih.gov/pubmed/26312577
StudyBivariate Genome-Wide Association Study Implicates ATP6V1G1 as a Novel Pleiotropic Locus Underlying Osteoporosis and Age at Menarche.
Disease/TraitBone mineral density (spine) and age at menarche
Initial sample826 Han Chinese ancestry females
Replication sample1,728 European ancestry females, 709 African American females, 408 Hispanic/Latin American females
Region7q21.12
Chromosome idchr7
Chromosome position87633265
Reported geneABCB1
Mapped geneABCB1, RUNDC3B
Upstream gene id
Downstream gene id
SNP gene ids5243, 154661
Upstream gene distance
Downstream gene distance
SNP risk allelers10264856-?
SNPsrs10264856
Merged
SNP id current10264856
Contextintron_variant
Intergenic0
Allele frequency
P value0.0000008
Pvalue mlog6.09691001300805
P value text(East Asian)
Or beta
%95 Ci
PlatformAffymetrix [702413]
CNVN
Mapped traitage at menarche, spine bone mineral density
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004703, http://www.ebi.ac.uk/efo/EFO_0007701
Study accessionGCST003101