SNP Detail For rs10259085
1.Mapping Information
Human SNP ID rs10259085
Human chromosome chr7
Human SNP position 7228800
Pig chromosome chr9
Pig SNP position 85096020
2.Annotation Information
PubMed ID19010793
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19010793
StudyGenome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis.
Disease/TraitMultiple sclerosis (severity)
Initial sample794 European ancestry cases, 883 European ancestry controls
Replication sampleNA
Region7p21.3
Chromosome idchr7
Chromosome position7228800
Reported geneC1GALT1
Mapped geneC1GALT1
Upstream gene id
Downstream gene id
SNP gene ids56913
Upstream gene distance
Downstream gene distance
SNP risk allelers10259085-?
SNPsrs10259085
Merged0
SNP id current10259085
Contextintron_variant
Intergenic0
Allele frequency0.46
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta
%95 Ci[NR]
PlatformIllumina [551642]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST000266