Human SNP ID | rs10259085 |
---|---|
Human chromosome | chr7 |
Human SNP position | 7228800 |
Pig chromosome | chr9 |
Pig SNP position | 85096020 |
PubMed ID | 19010793 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19010793 |
Study | Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis. |
Disease/Trait | Multiple sclerosis (severity) |
Initial sample | 794 European ancestry cases, 883 European ancestry controls |
Replication sample | NA |
Region | 7p21.3 |
Chromosome id | chr7 |
Chromosome position | 7228800 |
Reported gene | C1GALT1 |
Mapped gene | C1GALT1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 56913 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10259085-? |
SNPs | rs10259085 |
Merged | 0 |
SNP id current | 10259085 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.46 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | |
%95 Ci | [NR] |
Platform | Illumina [551642] |
CNV | N |
Mapped trait | multiple sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003885 |
Study accession | GCST000266 |