Human SNP ID | rs10253361 |
---|---|
Human chromosome | chr7 |
Human SNP position | 121635175 |
Pig chromosome | chr18 |
Pig SNP position | 27005930 |
PubMed ID | 21529783 |
---|---|
Journal | Biol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/21529783 |
Study | A quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications. |
Disease/Trait | Alcoholism (alcohol dependence factor score) |
Initial sample | 2,062 European ancestry alcohol dependence cases, 6,692 European ancestry controls |
Replication sample | 3,393 European ancestry individuals |
Region | 7q31.32 |
Chromosome id | chr7 |
Chromosome position | 121635175 |
Reported gene | intergenic |
Mapped gene | LOC105375478 - LOC105375480 |
Upstream gene id | 105375478 |
Downstream gene id | 105375480 |
SNP gene ids | |
Upstream gene distance | 130016 |
Downstream gene distance | 96507 |
SNP risk allele | rs10253361-T |
SNPs | rs10253361 |
Merged | 0 |
SNP id current | 10253361 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.38 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.076 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [~ 300000] |
CNV | N |
Mapped trait | alcohol dependence |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003829 |
Study accession | GCST001054 |