SNP Detail For rs10253361
1.Mapping Information
Human SNP ID rs10253361
Human chromosome chr7
Human SNP position 121635175
Pig chromosome chr18
Pig SNP position 27005930
2.Annotation Information
PubMed ID21529783
JournalBiol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/21529783
StudyA quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications.
Disease/TraitAlcoholism (alcohol dependence factor score)
Initial sample2,062 European ancestry alcohol dependence cases, 6,692 European ancestry controls
Replication sample3,393 European ancestry individuals
Region7q31.32
Chromosome idchr7
Chromosome position121635175
Reported geneintergenic
Mapped geneLOC105375478 - LOC105375480
Upstream gene id105375478
Downstream gene id105375480
SNP gene ids
Upstream gene distance130016
Downstream gene distance96507
SNP risk allelers10253361-T
SNPsrs10253361
Merged0
SNP id current10253361
Contextintergenic_variant
Intergenic1
Allele frequency0.38
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta0.076
%95 Ci[NR] unit decrease
PlatformIllumina [~ 300000]
CNVN
Mapped traitalcohol dependence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003829
Study accessionGCST001054