SNP Detail For rs1024889
1.Mapping Information
Human SNP ID rs1024889
Human chromosome chr3
Human SNP position 70414179
Pig chromosome chr13
Pig SNP position 57287155
2.Annotation Information
PubMed ID19851299
JournalObesity (Silver Spring)
Linkwww.ncbi.nlm.nih.gov/pubmed/19851299
StudyLinkage and genome-wide association analysis of obesity-related phenotypes: association of weight with the MGAT1 gene.
Disease/TraitBody mass index
Initial sample1,079 South Tyrolian individuals, 790 Dutch founder individuals, 2,060 European ancestry individuals
Replication sampleNA
Region3p13
Chromosome idchr3
Chromosome position70414179
Reported geneNR
Mapped geneLOC105377150 - LOC105377152
Upstream gene id105377150
Downstream gene id105377152
SNP gene ids
Upstream gene distance164511
Downstream gene distance160951
SNP risk allelers1024889-G
SNPsrs1024889
Merged0
SNP id current1024889
Contextintergenic_variant
Intergenic1
Allele frequency0.28
P value0.000006
Pvalue mlog5.22184874961635
P value text(males)
Or beta0.12
%95 Ci[NR] kg increase
PlatformIllumina [318237]
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST000512