SNP Detail For rs10230193
1.Mapping Information
Human SNP ID rs10230193
Human chromosome chr7
Human SNP position 50325030
Pig chromosome chr9
Pig SNP position 149827175
2.Annotation Information
PubMed ID25524916
JournalDiabetes
Linkwww.ncbi.nlm.nih.gov/pubmed/25524916
StudyGenetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium.
Disease/TraitGlucose homeostasis traits
Initial sampleup to 4,176 Mexican American individuals
Replication sampleNA
Region7p12.2
Chromosome idchr7
Chromosome position50325030
Reported geneIKZF1
Mapped geneIKZF1
Upstream gene id
Downstream gene id
SNP gene ids10320
Upstream gene distance
Downstream gene distance
SNP risk allelers10230193-?
SNPsrs10230193
Merged0
SNP id current10230193
Contextintron_variant
Intergenic0
Allele frequency
P value0.000007
Pvalue mlog5.15490195998574
P value text(AIRg)
Or beta1.79
%95 Ci[0.75-2.83] unit decrease
PlatformIllumina [693128]
CNVN
Mapped traitglucose homeostasis measurement, acute insulin response measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006896, http://www.ebi.ac.uk/efo/EFO_0006831
Study accessionGCST002726