Human SNP ID | rs10230193 |
---|---|
Human chromosome | chr7 |
Human SNP position | 50325030 |
Pig chromosome | chr9 |
Pig SNP position | 149827175 |
PubMed ID | 25524916 |
---|---|
Journal | Diabetes |
Link | www.ncbi.nlm.nih.gov/pubmed/25524916 |
Study | Genetic Variants Associated with Quantitative Glucose Homeostasis Traits Translate to Type 2 Diabetes in Mexican Americans: The GUARDIAN (Genetics Underlying Diabetes in Hispanics) Consortium. |
Disease/Trait | Glucose homeostasis traits |
Initial sample | up to 4,176 Mexican American individuals |
Replication sample | NA |
Region | 7p12.2 |
Chromosome id | chr7 |
Chromosome position | 50325030 |
Reported gene | IKZF1 |
Mapped gene | IKZF1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10320 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10230193-? |
SNPs | rs10230193 |
Merged | 0 |
SNP id current | 10230193 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (AIRg) |
Or beta | 1.79 |
%95 Ci | [0.75-2.83] unit decrease |
Platform | Illumina [693128] |
CNV | N |
Mapped trait | glucose homeostasis measurement, acute insulin response measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006896, http://www.ebi.ac.uk/efo/EFO_0006831 |
Study accession | GCST002726 |