Human SNP ID | rs10224002 |
---|---|
Human chromosome | chr7 |
Human SNP position | 151717955 |
Pig chromosome | chr18 |
Pig SNP position | 5938422 |
PubMed ID | 19862010 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19862010 |
Study | Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium. |
Disease/Trait | Hemoglobin |
Initial sample | 24,167 European ancestry individuals |
Replication sample | 9,456 European ancestry individuals |
Region | 7q36.1 |
Chromosome id | chr7 |
Chromosome position | 151717955 |
Reported gene | PRKAG2 |
Mapped gene | PRKAG2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 51422 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10224002-G |
SNPs | rs10224002 |
Merged | 0 |
SNP id current | 10224002 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000000000003 |
Pvalue mlog | 14.5228787452803 |
P value text | |
Or beta | 0.07 |
%95 Ci | [0.05-0.09] g/dl increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | hemoglobin measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004509 |
Study accession | GCST000499 |
PubMed ID | 19862010 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19862010 |
Study | Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium. |
Disease/Trait | Hematocrit |
Initial sample | 24,167 European ancestry individuals |
Replication sample | 9,456 European ancestry individuals |
Region | 7q36.1 |
Chromosome id | chr7 |
Chromosome position | 151717955 |
Reported gene | PRKAG2 |
Mapped gene | PRKAG2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 51422 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10224002-G |
SNPs | rs10224002 |
Merged | 0 |
SNP id current | 10224002 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000000000000006 |
Pvalue mlog | 14.2218487496163 |
P value text | |
Or beta | 0.2 |
%95 Ci | [0.15-0.25] % increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | hematocrit |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004348 |
Study accession | GCST000502 |