SNP Detail For rs1021993
1.Mapping Information
Human SNP ID rs1021993
Human chromosome chr1
Human SNP position 209339028
Pig chromosome chr9
Pig SNP position 146840355
2.Annotation Information
PubMed ID26528553
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26528553
StudyGenome-Wide Association Studies of the Human Gut Microbiota.
Disease/TraitGut microbiome composition (winter)
Initial sample93 Hutterite individuals
Replication sampleNA
Region1q32.2
Chromosome idchr1
Chromosome position209339028
Reported geneNR
Mapped geneLOC105372897 - LOC101929476
Upstream gene id105372897
Downstream gene id101929476
SNP gene ids
Upstream gene distance10496
Downstream gene distance33014
SNP risk allelers1021993-?
SNPsrs1021993
Merged
SNP id current1021993
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.0000004
Pvalue mlog6.39794000867203
P value text(family_Pasteurellaceae)
Or beta0.7293385
%95 Ci[0.47-0.98] unit increase
PlatformAffymetrix [211319]
CNVN
Mapped trait
Mapped trait URI
Study accessionGCST003223