SNP Detail For rs10213084
1.Mapping Information
Human SNP ID rs10213084
Human chromosome chr4
Human SNP position 146578186
Pig chromosome chr8
Pig SNP position 87244797
2.Annotation Information
PubMed ID23583979
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23583979
StudyIdentification of heart rate-associated loci and their effects on cardiac conduction and rhythm disorders.
Disease/TraitHeart rate
Initial sample85,787 European ancestry individuals, 6,568 Indian Asian ancestry indiviudals
Replication sample88,823 European ancestry individuals
Region4q31.22
Chromosome idchr4
Chromosome position146578186
Reported geneSLC10A7
Mapped geneSLC10A7 - POU4F2
Upstream gene id84068
Downstream gene id5458
SNP gene ids
Upstream gene distance56215
Downstream gene distance60707
SNP risk allelers10213084-G
SNPsrs10213084
Merged0
SNP id current10213084
Contextupstream_gene_variant
Intergenic1
Allele frequency0.869
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2516789] (imputed)
CNVN
Mapped traitheart rate
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004326
Study accessionGCST001969