SNP Detail For rs10208407
1.Mapping Information
Human SNP ID rs10208407
Human chromosome chr2
Human SNP position 160900618
Pig chromosome chr15
Pig SNP position 75040496
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region2q24.2
Chromosome idchr2
Chromosome position160900618
Reported geneTANK
Mapped geneLOC105373718 - LOC105373719
Upstream gene id105373718
Downstream gene id105373719
SNP gene ids
Upstream gene distance252109
Downstream gene distance167158
SNP risk allelers10208407-A
SNPsrs10208407
Merged0
SNP id current10208407
Contextintergenic_variant
Intergenic1
Allele frequency0.008
P value0.000002
Pvalue mlog5.69897000433601
P value text(Vigorous activity )
Or beta0.03
%95 Ci[NR] %awake time increase
PlatformIllumina [899892]
CNVN
Mapped traitphysical activity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003940
Study accessionGCST001762