SNP Detail For rs10207628
1.Mapping Information
Human SNP ID rs10207628
Human chromosome chr2
Human SNP position 127094445
Pig chromosome chr15
Pig SNP position 29020114
2.Annotation Information
PubMed ID22005930
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22005930
StudyGenome-wide association study of Alzheimer__s disease with psychotic symptoms.
Disease/TraitPsychosis and Alzheimer__s disease
Initial sample1,039 European ancestry cases with psychosis, 5,659 European ancestry controls, 260 European, African American and Native American ancestry cases with psychosis from 264 families
Replication sampleNA
Region2q14.3
Chromosome idchr2
Chromosome position127094445
Reported geneBIN1
Mapped geneBIN1
Upstream gene id
Downstream gene id
SNP gene ids274
Upstream gene distance
Downstream gene distance
SNP risk allelers10207628-?
SNPsrs10207628
Merged0
SNP id current10207628
Contextintron_variant
Intergenic0
Allele frequency0.81
P value0.000001
Pvalue mlog6
P value text
Or beta1.4084507
%95 Ci[NR]
PlatformIllumina [1847262] (imputed)
CNVN
Mapped traitAlzheimers disease, psychotic symptoms
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249, http://www.ebi.ac.uk/efo/EFO_0005940
Study accessionGCST001285