SNP Detail For rs1020410
1.Mapping Information
Human SNP ID rs1020410
Human chromosome chr2
Human SNP position 175919410
Pig chromosome chr15
Pig SNP position 91025124
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region2q31.1
Chromosome idchr2
Chromosome position175919410
Reported geneKIAA1715
Mapped geneLOC105373752 - KIAA1715
Upstream gene id105373752
Downstream gene id80856
SNP gene ids
Upstream gene distance448153
Downstream gene distance4452
SNP risk allelers1020410-G
SNPsrs1020410
Merged0
SNP id current1020410
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.268
P value0.0000006
Pvalue mlog6.22184874961635
P value text(Calorimeter activity )
Or beta0.04
%95 Ci[NR] counts/d increase
PlatformIllumina [899892]
CNVN
Mapped traitphysical activity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003940
Study accessionGCST001762