SNP Detail For rs10198175
1.Mapping Information
Human SNP ID rs10198175
Human chromosome chr2
Human SNP position 20934123
Pig chromosome chr3
Pig SNP position 125207184
2.Annotation Information
PubMed ID24882193
JournalJ Affect Disord
Linkwww.ncbi.nlm.nih.gov/pubmed/24882193
StudyBipolar disorder with comorbid binge eating history: A genome-wide association study implicates APOB.
Disease/TraitBinge eating behaviour and bipolar disorder
Initial sample206 European ancestry cases with binge eating behavior, 723 European ancestry cases without binge eating behavior, 1,034 European ancestry controls
Replication sample70 European ancestry cases with binge eating behavior, 758 European ancestry cases without binge eating behavior, 832 European ancestry controls
Region2p24.1
Chromosome idchr2
Chromosome position20934123
Reported geneAPOB
Mapped geneLOC101928271 - APOB
Upstream gene id101928271
Downstream gene id338
SNP gene ids
Upstream gene distance72462
Downstream gene distance65095
SNP risk allelers10198175-?
SNPsrs10198175
Merged0
SNP id current10198175
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta1.92
%95 Ci[NR]
PlatformAffymetrix [8466825] (imputed)
CNVN
Mapped traitbinge eating, bipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005924, http://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST002419