SNP Detail For rs10191411
1.Mapping Information
Human SNP ID rs10191411
Human chromosome chr2
Human SNP position 148630399
Pig chromosome chr15
Pig SNP position 3134445
2.Annotation Information
PubMed ID18464913
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/18464913
StudyA genome-wide association study identifies protein quantitative trait loci (pQTLs).
Disease/TraitProtein quantitative trait loci
Initial sample1,200 European ancestry individuals
Replication sampleup to 4,590 European ancestry individuals
Region2q23.1
Chromosome idchr2
Chromosome position148630399
Reported geneEPC2
Mapped geneRPS29P8 - EPC2
Upstream gene id100132376
Downstream gene id26122
SNP gene ids
Upstream gene distance34984
Downstream gene distance14412
SNP risk allelers10191411-?
SNPsrs10191411
Merged0
SNP id current10191411
Contextintergenic_variant
Intergenic1
Allele frequency0.32
P value0.000004
Pvalue mlog5.39794000867203
P value text(IL8)
Or beta
%95 Ci
PlatformIllumina [496032]
CNVN
Mapped traitinterleukin-8 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004811
Study accessionGCST000189