Human SNP ID | rs10191411 |
---|---|
Human chromosome | chr2 |
Human SNP position | 148630399 |
Pig chromosome | chr15 |
Pig SNP position | 3134445 |
PubMed ID | 18464913 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18464913 |
Study | A genome-wide association study identifies protein quantitative trait loci (pQTLs). |
Disease/Trait | Protein quantitative trait loci |
Initial sample | 1,200 European ancestry individuals |
Replication sample | up to 4,590 European ancestry individuals |
Region | 2q23.1 |
Chromosome id | chr2 |
Chromosome position | 148630399 |
Reported gene | EPC2 |
Mapped gene | RPS29P8 - EPC2 |
Upstream gene id | 100132376 |
Downstream gene id | 26122 |
SNP gene ids | |
Upstream gene distance | 34984 |
Downstream gene distance | 14412 |
SNP risk allele | rs10191411-? |
SNPs | rs10191411 |
Merged | 0 |
SNP id current | 10191411 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.32 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (IL8) |
Or beta | |
%95 Ci | |
Platform | Illumina [496032] |
CNV | N |
Mapped trait | interleukin-8 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004811 |
Study accession | GCST000189 |