Human SNP ID | rs10189629 |
---|---|
Human chromosome | chr2 |
Human SNP position | 102263004 |
Pig chromosome | chr3 |
Pig SNP position | 54560145 |
PubMed ID | 23817569 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23817569 |
Study | A genome-wide association meta-analysis of self-reported allergy identifies shared and allergy-specific susceptibility loci. |
Disease/Trait | Self-reported allergy |
Initial sample | 53,862 European ancestry individuals |
Replication sample | NA |
Region | 2q12.1 |
Chromosome id | chr2 |
Chromosome position | 102263004 |
Reported gene | IL1RL1, IL1RL2 |
Mapped gene | FAM183DP - IL1RL1 |
Upstream gene id | 101060105 |
Downstream gene id | 9173 |
SNP gene ids | |
Upstream gene distance | 12210 |
Downstream gene distance | 48498 |
SNP risk allele | rs10189629-A |
SNPs | rs10189629 |
Merged | 0 |
SNP id current | 10189629 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.145 |
P value | 0.0000000000000002 |
Pvalue mlog | 15.698970004336 |
P value text | |
Or beta | 0.1448 |
%95 Ci | [0.11-0.18] unit decrease |
Platform | Illumina [2400000] (imputed) |
CNV | N |
Mapped trait | allergy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003785 |
Study accession | GCST002083 |