Human SNP ID | rs10189050 |
---|---|
Human chromosome | chr2 |
Human SNP position | 22901686 |
Pig chromosome | chr3 |
Pig SNP position | 122918991 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 2p24.1 |
Chromosome id | chr2 |
Chromosome position | 22901686 |
Reported gene | KLHL29 |
Mapped gene | LOC105374322 - LOC101929251 |
Upstream gene id | 105374322 |
Downstream gene id | 101929251 |
SNP gene ids | |
Upstream gene distance | 356923 |
Downstream gene distance | 117289 |
SNP risk allele | rs10189050-C |
SNPs | rs10189050 |
Merged | 0 |
SNP id current | 10189050 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.053 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (Vigorous activity ) |
Or beta | 0.03 |
%95 Ci | [NR] min/d increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | physical activity |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003940 |
Study accession | GCST001762 |