SNP Detail For rs10180496
1.Mapping Information
Human SNP ID rs10180496
Human chromosome chr2
Human SNP position 12828774
Pig chromosome chr3
Pig SNP position 132621045
2.Annotation Information
PubMed ID23064961
JournalJ Dent Res
Linkwww.ncbi.nlm.nih.gov/pubmed/23064961
StudyGWAS of dental caries patterns in the permanent dentition.
Disease/TraitDental caries
Initial sample920 European ancestry individuals
Replication sampleNA
Region2p24.3
Chromosome idchr2
Chromosome position12828774
Reported geneTRIB2
Mapped geneTRIB2 - LOC100506474
Upstream gene id28951
Downstream gene id100506474
SNP gene ids
Upstream gene distance86040
Downstream gene distance138008
SNP risk allelers10180496-?
SNPsrs10180496
Merged0
SNP id current10180496
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.0000001
Pvalue mlog7
P value text(DMFS5, DMFS5mand)
Or beta
%95 Ci
PlatformIllumina [518997]
CNVN
Mapped traitdental caries
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003819
Study accessionGCST001713