SNP Detail For rs10176394
1.Mapping Information
Human SNP ID rs10176394
Human chromosome chr2
Human SNP position 143338805
Pig chromosome chr15
Pig SNP position 9367831
2.Annotation Information
PubMed ID24556642
JournalCaries Res
Linkwww.ncbi.nlm.nih.gov/pubmed/24556642
StudyGenome-wide association study of primary dentition pit-and-fissure and smooth surface caries.
Disease/TraitSmooth-surface caries
Initial sample1006 European ancestry individuals
Replication sampleNA
Region2q22.2
Chromosome idchr2
Chromosome position143338805
Reported geneARHGAP15
Mapped geneARHGAP15
Upstream gene id
Downstream gene id
SNP gene ids55843
Upstream gene distance
Downstream gene distance
SNP risk allelers10176394-T
SNPsrs10176394
Merged0
SNP id current10176394
Contextintron_variant
Intergenic0
Allele frequency0.1431
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.7701
%95 Ci[NR] unit decrease
PlatformIllumina [1216189] (imputed)
CNVN
Mapped traitsmooth surface dental caries
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006339
Study accessionGCST002361