SNP Detail For rs10174949
1.Mapping Information
Human SNP ID rs10174949
Human chromosome chr2
Human SNP position 8302118
Pig chromosome chr3
Pig SNP position 136087773
2.Annotation Information
PubMed ID23817569
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23817569
StudyA genome-wide association meta-analysis of self-reported allergy identifies shared and allergy-specific susceptibility loci.
Disease/TraitSelf-reported allergy
Initial sample53,862 European ancestry individuals
Replication sampleNA
Region2p25.1
Chromosome idchr2
Chromosome position8302118
Reported geneID2
Mapped geneLINC00299
Upstream gene id
Downstream gene id
SNP gene ids339789
Upstream gene distance
Downstream gene distance
SNP risk allelers10174949-A
SNPsrs10174949
Merged0
SNP id current10174949
Contextintron_variant
Intergenic0
Allele frequency0.2728
P value0.0000001
Pvalue mlog7
P value text
Or beta0.0703
%95 Ci[0.044-0.096] unit decrease
PlatformIllumina [2400000] (imputed)
CNVN
Mapped traitallergy
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003785
Study accessionGCST002083