Human SNP ID | rs10174949 |
---|---|
Human chromosome | chr2 |
Human SNP position | 8302118 |
Pig chromosome | chr3 |
Pig SNP position | 136087773 |
PubMed ID | 23817569 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23817569 |
Study | A genome-wide association meta-analysis of self-reported allergy identifies shared and allergy-specific susceptibility loci. |
Disease/Trait | Self-reported allergy |
Initial sample | 53,862 European ancestry individuals |
Replication sample | NA |
Region | 2p25.1 |
Chromosome id | chr2 |
Chromosome position | 8302118 |
Reported gene | ID2 |
Mapped gene | LINC00299 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 339789 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10174949-A |
SNPs | rs10174949 |
Merged | 0 |
SNP id current | 10174949 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.2728 |
P value | 0.0000001 |
Pvalue mlog | 7 |
P value text | |
Or beta | 0.0703 |
%95 Ci | [0.044-0.096] unit decrease |
Platform | Illumina [2400000] (imputed) |
CNV | N |
Mapped trait | allergy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003785 |
Study accession | GCST002083 |