SNP Detail For rs10167079
1.Mapping Information
Human SNP ID rs10167079
Human chromosome chr2
Human SNP position 214392947
Pig chromosome chr15
Pig SNP position 129301378
2.Annotation Information
PubMed ID25673413
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25673413
StudyGenetic studies of body mass index yield new insights for obesity biology.
Disease/TraitBody mass index
Initial sampleup to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals
Replication sampleup to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828
Region2q34
Chromosome idchr2
Chromosome position214392947
Reported geneSPAG16
Mapped geneSPAG16, LOC105373866
Upstream gene id
Downstream gene id
SNP gene ids79582, 105373866
Upstream gene distance
Downstream gene distance
SNP risk allelers10167079-G
SNPsrs10167079
Merged0
SNP id current10167079
Contextintron_variant
Intergenic0
Allele frequency0.894
P value0.000003
Pvalue mlog5.52287874528033
P value text(EA)
Or beta0.024
%95 Ci[0.014-0.034] kg/m2 increase
PlatformAffymetrix, Illumina [2550021]
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002783