SNP Detail For rs10166461
1.Mapping Information
Human SNP ID rs10166461
Human chromosome chr2
Human SNP position 127101837
Pig chromosome chr15
Pig SNP position 29013936
2.Annotation Information
PubMed ID25188341
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25188341
StudyGenome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias.
Disease/TraitNeurofibrillary tangles
Initial sampleup to 4,707 individuals
Replication sampleNA
Region2q14.3
Chromosome idchr2
Chromosome position127101837
Reported geneBIN1
Mapped geneBIN1
Upstream gene id
Downstream gene id
SNP gene ids274
Upstream gene distance
Downstream gene distance
SNP risk allelers10166461-A
SNPsrs10166461
Merged0
SNP id current10166461
Contextintron_variant
Intergenic0
Allele frequency0.1733
P value0.000004
Pvalue mlog5.39794000867203
P value text(Ordinal II)
Or beta0.2636
%95 Ci[0.15-0.38] unit decrease
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitneurofibrilliary tangles measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006797
Study accessionGCST002594