SNP Detail For rs10159528
1.Mapping Information
Human SNP ID rs10159528
Human chromosome chr10
Human SNP position 85725660
Pig chromosome chr14
Pig SNP position 93528818
2.Annotation Information
PubMed ID26053186
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26053186
StudyMercapturic Acids Derived from the Toxicants Acrolein and Crotonaldehyde in the Urine of Cigarette Smokers from Five Ethnic Groups with Differing Risks for Lung Cancer.
Disease/Trait3-hydroxypropylmercapturic acid levels in smokers
Initial sample362 African American current smoker individuals, 329 Native Hawaiian ancestry current smoker individuals, 438 European ancestry current smoker individuals, 449 Latino current smoker individuals, 704 Japanese ancestry current smoker individuals
Replication sampleNA
Region10q23.1
Chromosome idchr10
Chromosome position85725660
Reported geneNR
Mapped geneGRID1
Upstream gene id
Downstream gene id
SNP gene ids2894
Upstream gene distance
Downstream gene distance
SNP risk allelers10159528-?
SNPsrs10159528
Merged
SNP id current10159528
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text(AA)
Or beta0.3793
%95 Ci[NR] unit increase
PlatformIllumina [up to 11892802] (imputed)
CNVN
Mapped traitsmoking behavior, 3-hydroxypropylmercapturic acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004318, http://www.ebi.ac.uk/efo/EFO_0007014
Study accessionGCST002956