Human SNP ID | rs10159477 |
---|---|
Human chromosome | chr10 |
Human SNP position | 69340132 |
Pig chromosome | chr14 |
Pig SNP position | 78418327 |
PubMed ID | 23222517 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/23222517 |
Study | Seventy-five genetic loci influencing the human red blood cell. |
Disease/Trait | Red blood cell traits |
Initial sample | 62,553 European ancestry individuals, 9,308 South Asian ancestry individuals |
Replication sample | 63,506 European ancestry individuals |
Region | 10q22.1 |
Chromosome id | chr10 |
Chromosome position | 69340132 |
Reported gene | HK1 |
Mapped gene | HK1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3098 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10159477-A |
SNPs | rs10159477 |
Merged | 0 |
SNP id current | 10159477 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.16 |
P value | 4E-20 |
Pvalue mlog | 19.397940008672 |
P value text | (EA, Hgb) |
Or beta | 0.087 |
%95 Ci | [0.067-0.107] unit increase |
Platform | Affymetrix, Illumina, Perlegen [2711806] (imputed) |
CNV | N |
Mapped trait | hemoglobin measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004509 |
Study accession | GCST001765 |