SNP Detail For rs10159477
1.Mapping Information
Human SNP ID rs10159477
Human chromosome chr10
Human SNP position 69340132
Pig chromosome chr14
Pig SNP position 78418327
2.Annotation Information
PubMed ID23222517
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/23222517
StudySeventy-five genetic loci influencing the human red blood cell.
Disease/TraitRed blood cell traits
Initial sample62,553 European ancestry individuals, 9,308 South Asian ancestry individuals
Replication sample63,506 European ancestry individuals
Region10q22.1
Chromosome idchr10
Chromosome position69340132
Reported geneHK1
Mapped geneHK1
Upstream gene id
Downstream gene id
SNP gene ids3098
Upstream gene distance
Downstream gene distance
SNP risk allelers10159477-A
SNPsrs10159477
Merged0
SNP id current10159477
Contextintron_variant
Intergenic0
Allele frequency0.16
P value4E-20
Pvalue mlog19.397940008672
P value text(EA, Hgb)
Or beta0.087
%95 Ci[0.067-0.107] unit increase
PlatformAffymetrix, Illumina, Perlegen [2711806] (imputed)
CNVN
Mapped traithemoglobin measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004509
Study accessionGCST001765