SNP Detail For rs10142119
1.Mapping Information
Human SNP ID rs10142119
Human chromosome chr14
Human SNP position 98020208
Pig chromosome chr7
Pig SNP position 126417604
2.Annotation Information
PubMed ID23967269
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23967269
StudyA genome-wide association study of total serum and mite-specific IgEs in asthma patients.
Disease/TraitIgE levels in asthmatics (D.f. specific)
Initial sample404 Korean ancestry D.f.-positive cases, 473 Korean ancestry D.f.-negative cases
Replication sampleNA
Region14q32.2
Chromosome idchr14
Chromosome position98020208
Reported geneLOC730217
Mapped geneLINC01550 - LOC105370655
Upstream gene id388011
Downstream gene id105370655
SNP gene ids
Upstream gene distance42084
Downstream gene distance59392
SNP risk allelers10142119-G
SNPsrs10142119
Merged0
SNP id current10142119
Contextintergenic_variant
Intergenic1
Allele frequency0.516
P value0.0000002
Pvalue mlog6.69897000433601
P value text
Or beta1.96
%95 Ci[1.52-2.56]
PlatformIllumina [442089]
CNVN
Mapped traitserum IgE measurement, asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004579, http://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST002125