Human SNP ID | rs1014137 |
---|---|
Human chromosome | chr7 |
Human SNP position | 31584132 |
Pig chromosome | chr18 |
Pig SNP position | 45712656 |
PubMed ID | 24578207 |
---|---|
Journal | Stroke |
Link | www.ncbi.nlm.nih.gov/pubmed/24578207 |
Study | Genome-wide genotyping demonstrates a polygenic risk score associated with white matter hyperintensity volume in CADASIL. |
Disease/Trait | White matter hyperintensity volume in cerebral autosomal-dominant arteriopathy with subcortical infarcts and leukoencephalopathy |
Initial sample | 466 European ancestry individuals |
Replication sample | NA |
Region | 7p14.3 |
Chromosome id | chr7 |
Chromosome position | 31584132 |
Reported gene | NR |
Mapped gene | CCDC129 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 223075 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1014137-C |
SNPs | rs1014137 |
Merged | 0 |
SNP id current | 1014137 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 0.0241 |
%95 Ci | [NR] unit increase |
Platform | Affymetrix [583499] |
CNV | N |
Mapped trait | CADASIL, white matter hyperintensity measurement |
Mapped trait URI | http://www.orpha.net/ORDO/Orphanet_136, http://www.ebi.ac.uk/efo/EFO_0005665 |
Study accession | GCST002377 |