Human SNP ID | rs10137082 |
---|---|
Human chromosome | chr14 |
Human SNP position | 23370824 |
Pig chromosome | chr7 |
Pig SNP position | 81024552 |
PubMed ID | 21980299 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21980299 |
Study | A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci. |
Disease/Trait | Type 1 diabetes |
Initial sample | 9,934 European ancestry cases, 16,956 European ancestry controls |
Replication sample | 1,120 European ancestry affected trios |
Region | 14q11.2 |
Chromosome id | chr14 |
Chromosome position | 23370824 |
Reported gene | NR |
Mapped gene | EFS - IL25 |
Upstream gene id | 10278 |
Downstream gene id | 64806 |
SNP gene ids | |
Upstream gene distance | 5191 |
Downstream gene distance | 1985 |
SNP risk allele | rs10137082-? |
SNPs | rs10137082 |
Merged | 0 |
SNP id current | 10137082 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 1.1 |
%95 Ci | [NR] |
Platform | Affymetrix, Illumina [~ 2540000] (imputed) |
CNV | N |
Mapped trait | type I diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001359 |
Study accession | GCST001255 |