SNP Detail For rs10137082
1.Mapping Information
Human SNP ID rs10137082
Human chromosome chr14
Human SNP position 23370824
Pig chromosome chr7
Pig SNP position 81024552
2.Annotation Information
PubMed ID21980299
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21980299
StudyA genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.
Disease/TraitType 1 diabetes
Initial sample9,934 European ancestry cases, 16,956 European ancestry controls
Replication sample1,120 European ancestry affected trios
Region14q11.2
Chromosome idchr14
Chromosome position23370824
Reported geneNR
Mapped geneEFS - IL25
Upstream gene id10278
Downstream gene id64806
SNP gene ids
Upstream gene distance5191
Downstream gene distance1985
SNP risk allelers10137082-?
SNPsrs10137082
Merged0
SNP id current10137082
Contextupstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta1.1
%95 Ci[NR]
PlatformAffymetrix, Illumina [~ 2540000] (imputed)
CNVN
Mapped traittype I diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001359
Study accessionGCST001255