Human SNP ID | rs10134944 |
---|---|
Human chromosome | chr14 |
Human SNP position | 57652478 |
Pig chromosome | chr1 |
Pig SNP position | 207618908 |
PubMed ID | 17554300 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/17554300 |
Study | Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls. |
Disease/Trait | Bipolar disorder |
Initial sample | 1,868 European ancestry cases, 2,938 European ancestry controls |
Replication sample | NA |
Region | 14q23.1 |
Chromosome id | chr14 |
Chromosome position | 57652478 |
Reported gene | NR |
Mapped gene | SLC35F4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 341880 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10134944-T |
SNPs | rs10134944 |
Merged | 0 |
SNP id current | 10134944 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.09 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 1.45 |
%95 Ci | [1.24-1.68] |
Platform | Affymetrix [469557] |
CNV | N |
Mapped trait | bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST000044 |
PubMed ID | 21254220 |
Journal | Genet Epidemiol |
Link | www.ncbi.nlm.nih.gov/pubmed/21254220 |
Study | Propensity score-based nonparametric test revealing genetic variants underlying bipolar disorder. |
Disease/Trait | Bipolar disorder |
Initial sample | 1,868 European ancestry cases, 2,938 European ancestry controls |
Replication sample | NA |
Region | 14q23.1 |
Chromosome id | chr14 |
Chromosome position | 57652478 |
Reported gene | NR |
Mapped gene | SLC35F4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 341880 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10134944-? |
SNPs | rs10134944 |
Merged | 0 |
SNP id current | 10134944 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (dominant) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [NR] |
CNV | N |
Mapped trait | bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST000961 |