Human SNP ID | rs10132280 |
---|---|
Human chromosome | chr14 |
Human SNP position | 25458973 |
Pig chromosome | chr7 |
Pig SNP position | 79029097 |
PubMed ID | 25673413 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673413 |
Study | Genetic studies of body mass index yield new insights for obesity biology. |
Disease/Trait | Body mass index |
Initial sample | up to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals |
Replication sample | up to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828 |
Region | 14q12 |
Chromosome id | chr14 |
Chromosome position | 25458973 |
Reported gene | STXBP6 |
Mapped gene | HMGN2P6 - LOC105370416 |
Upstream gene id | 643872 |
Downstream gene id | 105370416 |
SNP gene ids | |
Upstream gene distance | 191527 |
Downstream gene distance | 368808 |
SNP risk allele | rs10132280-C |
SNPs | rs10132280 |
Merged | 0 |
SNP id current | 10132280 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.68 |
P value | 0.00000000005 |
Pvalue mlog | 10.3010299956639 |
P value text | (EA, men) |
Or beta | 0.029 |
%95 Ci | [0.02-0.038] kg/m2 increase |
Platform | Affymetrix, Illumina [2550021] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002783 |
PubMed ID | 25673413 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673413 |
Study | Genetic studies of body mass index yield new insights for obesity biology. |
Disease/Trait | Body mass index |
Initial sample | up to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals |
Replication sample | up to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828 |
Region | 14q12 |
Chromosome id | chr14 |
Chromosome position | 25458973 |
Reported gene | STXBP6 |
Mapped gene | HMGN2P6 - LOC105370416 |
Upstream gene id | 643872 |
Downstream gene id | 105370416 |
SNP gene ids | |
Upstream gene distance | 191527 |
Downstream gene distance | 368808 |
SNP risk allele | rs10132280-C |
SNPs | rs10132280 |
Merged | 0 |
SNP id current | 10132280 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.682 |
P value | 0.00000000001 |
Pvalue mlog | 11 |
P value text | (EA) |
Or beta | 0.023 |
%95 Ci | [0.016-0.03] kg/m2 increase |
Platform | Affymetrix, Illumina [2550021] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002783 |
PubMed ID | 25673413 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673413 |
Study | Genetic studies of body mass index yield new insights for obesity biology. |
Disease/Trait | Body mass index |
Initial sample | up to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals |
Replication sample | up to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828 |
Region | 14q12 |
Chromosome id | chr14 |
Chromosome position | 25458973 |
Reported gene | STXBP6 |
Mapped gene | HMGN2P6 - LOC105370416 |
Upstream gene id | 643872 |
Downstream gene id | 105370416 |
SNP gene ids | |
Upstream gene distance | 191527 |
Downstream gene distance | 368808 |
SNP risk allele | rs10132280-C |
SNPs | rs10132280 |
Merged | 0 |
SNP id current | 10132280 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.674 |
P value | 0.00000000001 |
Pvalue mlog | 11 |
P value text | |
Or beta | 0.022 |
%95 Ci | [0.016-0.029] kg/m2 increase |
Platform | Affymetrix, Illumina [2550021] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002783 |