Human SNP ID | rs1013063 |
---|---|
Human chromosome | chr21 |
Human SNP position | 34326090 |
Pig chromosome | chr13 |
Pig SNP position | 207764610 |
PubMed ID | 23192594 |
---|---|
Journal | Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23192594 |
Study | Gene-environment interactions and obesity traits among postmenopausal African-American and Hispanic women in the Women__s Health Initiative SHARe Study. |
Disease/Trait | Body mass index (interaction) |
Initial sample | 8,203 African American females, 3,484 Hispanic females |
Replication sample | NA |
Region | 21q22.11 |
Chromosome id | chr21 |
Chromosome position | 34326090 |
Reported gene | KCNE2, LOC100130240 |
Mapped gene | LINC00310 - LOC105372791 |
Upstream gene id | 114036 |
Downstream gene id | 105372791 |
SNP gene ids | |
Upstream gene distance | 136171 |
Downstream gene distance | 26947 |
SNP risk allele | rs1013063-T |
SNPs | rs1013063 |
Merged | 0 |
SNP id current | 1013063 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.38 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (Hispanic, Smoking, years) |
Or beta | 0.08 |
%95 Ci | [0.04-0.11] unit decrease |
Platform | Affymetrix [706791] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST001753 |