Human SNP ID | rs10124550 |
---|---|
Human chromosome | chr9 |
Human SNP position | 16512750 |
Pig chromosome | chr1 |
Pig SNP position | 230018532 |
PubMed ID | 23934736 |
---|---|
Journal | Genet Epidemiol |
Link | www.ncbi.nlm.nih.gov/pubmed/23934736 |
Study | Genome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study. |
Disease/Trait | Metabolite levels (Pyroglutamine) |
Initial sample | 1,260 African American individuals |
Replication sample | NA |
Region | 9p22.3 |
Chromosome id | chr9 |
Chromosome position | 16512750 |
Reported gene | BNC2 |
Mapped gene | BNC2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54796 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10124550-A |
SNPs | rs10124550 |
Merged | 0 |
SNP id current | 10124550 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | |
Or beta | 0.16 |
%95 Ci | [0.09-0.21] unit increase |
Platform | Affymetrix [~ 2500000] (imputed) |
CNV | N |
Mapped trait | pyroglutamine measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005408 |
Study accession | GCST002118 |