SNP Detail For rs1012307
1.Mapping Information
Human SNP ID rs1012307
Human chromosome chr2
Human SNP position 149798707
Pig chromosome chr15
Pig SNP position 1719108
2.Annotation Information
PubMed ID24824216
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24824216
StudyGenome-wide interaction studies reveal sex-specific asthma risk alleles.
Disease/TraitAsthma (sex interaction)
Initial sample1,052 European ancestry male cases, 1,019 European ancestry female cases, 709 European ancestry male controls, 826 European ancestry female controls, 675 African American/African Caribbean male cases, 837 African American/African Caribbean female cases, 5
Replication sampleNA
Region2q23.3
Chromosome idchr2
Chromosome position149798707
Reported geneAK057517
Mapped geneLOC101929231
Upstream gene id
Downstream gene id
SNP gene ids101929231
Upstream gene distance
Downstream gene distance
SNP risk allelers1012307-C
SNPsrs1012307
Merged0
SNP id current1012307
Contextintron_variant
Intergenic0
Allele frequency0.2
P value0.0000008
Pvalue mlog6.09691001300805
P value text(African American/African Caribbean, female)
Or beta1.44
%95 Ci[1.25-1.67]
PlatformAffymetrix, Illumina [~ 2100000] (imputed)
CNVN
Mapped traitasthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST002445