Human SNP ID | rs1012307 |
---|---|
Human chromosome | chr2 |
Human SNP position | 149798707 |
Pig chromosome | chr15 |
Pig SNP position | 1719108 |
PubMed ID | 24824216 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24824216 |
Study | Genome-wide interaction studies reveal sex-specific asthma risk alleles. |
Disease/Trait | Asthma (sex interaction) |
Initial sample | 1,052 European ancestry male cases, 1,019 European ancestry female cases, 709 European ancestry male controls, 826 European ancestry female controls, 675 African American/African Caribbean male cases, 837 African American/African Caribbean female cases, 5 |
Replication sample | NA |
Region | 2q23.3 |
Chromosome id | chr2 |
Chromosome position | 149798707 |
Reported gene | AK057517 |
Mapped gene | LOC101929231 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101929231 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1012307-C |
SNPs | rs1012307 |
Merged | 0 |
SNP id current | 1012307 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.2 |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | (African American/African Caribbean, female) |
Or beta | 1.44 |
%95 Ci | [1.25-1.67] |
Platform | Affymetrix, Illumina [~ 2100000] (imputed) |
CNV | N |
Mapped trait | asthma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000270 |
Study accession | GCST002445 |